数据与研究

torch-geometric

k-dense-ai/scie…t-skills

Supports PyTorch Geometric (PyG) graph neural networks — node/link/graph classification, message passing (GCN, GAT, GraphSAGE, GIN), heterogeneous graphs, neighbor sampling, and custom datasets. Use when working with torch_geometric, not for general NetworkX analytics or non-graph PyTorch models.

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安装命令

npx skills add https://github.com/k-dense-ai/scientific-agent-skills --skill torch-geometric

SKILL.md

PyTorch Geometric (PyG)

PyG is the standard library for Graph Neural Networks built on PyTorch. It provides data structures for graphs, 60+ GNN layer implementations, scalable mini-batch training, and support for heterogeneous graphs.

Installation

Reviewed released torch-geometric 2.8.0.post1 (2026-10-01); CPU examples tested with Python 3.13 / PyTorch 2.14.1. Rolling latest docs identify 2.9.0; check the installed release before adopting new APIs. PyG 2.8 requires PyTorch 2.9+; its original release table covers 2.9–2.12. Our 2.14.1 core tests do not establish every extension/backend combination.

# Install the PyTorch build for your platform from https://pytorch.org/get-started/locally/
uv pip install torch==2.14.1
uv pip install torch-geometric==2.8.0.post1
python -c "import torch, torch_geometric; print(torch.__version__, torch.version.cuda, torch_geometric.__version__)"

Basic tensor-based layers need no extensions. Neighbor sampling requires pyg-lib or torch-sparse; spatial k-NN operators require pyg-lib in 2.8. torch-cluster and torch-spline-conv are deprecated and ignored. Inspect the wheel index for your exact Python/OS/Torch/CUDA tuple. Never install wheels for a different Torch release merely because core imports succeed. The tested macOS ARM CPU extension is below; choose a different matching wheel for other platforms, and verify its operators: