后端与数据库

uniprot-database

google-deepmind/science-skills

Access protein metadata, function, taxonomy, and sequences across UniProtKB, UniParc, and UniRef. Use when searching for proteins, mapping identifiers, or retrieving functional annotations and publications. Don't use for sequence alignment, protein folding, or sequence similarity search (use specialized skills for those tasks).

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安装命令

npx skills add https://github.com/google-deepmind/science-skills --skill uniprot-database

SKILL.md

UniProt Database Access

Prerequisites

  1. uv: Read the uv skill and follow its Setup instructions to ensure uv is installed and on PATH.
  2. User Notification: If .licenses/uniprot_database_LICENSE.txt does not already exist in the workspace root directory then (1) prominently notify the user to check the terms at https://www.uniprot.org/help/license and https://www.uniprot.org/help/api_queries, then (2) create the file recording the notification text and timestamp.

Overview

Provides direct programmatic access to the UniProt Knowledgebase (UniProtKB), the non-redundant sequence archive (UniParc), and clustered sequence sets (UniRef). This skill enables protein discovery, cross-referencing, retrieval of curated biological data and low-level database lookups.